10598561 | Bioorganic Chemistry | 1st | 6 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the topics listed below. The student will be able to describe the structure of a collection of enzymes, representative of the main reaction mechanisms of bio-organic chemistry and enzymatic classes, using programs for visualization and interactive analysis of biological macromolecules. The student will be able to predict, on the basis of the structure of the active sites of the representative enzymes, their mechanism of action and acceleration of the reaction rate, using the main experimental kinetic investigation methods.
Specific skills.
a) knowledge and understanding:
through the lessons and exercises the student will have to know and understand the relationship between structure and function of the main classes of enzymes involved in the metabolic reactions of the cell; he/she will have to understand the structural basis of rate acceleration; he/she must be able to access and use the databases of the structures of biological macromolecules;
b) applying knowledge and understanding:
the student will be able to use the main theoretical paradigms to interpret the reaction mechanisms of enzymes, and to apply the acquired knowledge for the prediction of the main mechanistic characteristics of new enzymes;
c) making judgments:
the student will be able to describe in full autonomy the mechanism of a chemical reaction catalyzed by an enzyme, highlighting its distinctive characteristics and suggesting experiments to demonstrate the underlying mechanism;
d) communication skills:
the student must have the ability to present and explain the mechanisms of action of enzymes, based on the structure-function relationship determined experimentally, and using scientific and technical language correctly and with rigor;
e) learning skills:
the student will be able to critically examine the course topics, to propose new and independent experimental strategies where possible, to update himself through the consultation of bibliographic and structural databases (eg PubMed and RCSB Protein Data Bank).
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Enzyme Catalysis | 1st | 3 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the topics listed below. The student will be able to describe the structure of a collection of enzymes, representative of the main reaction mechanisms of bio-organic chemistry and enzymatic classes, using programs for visualization and interactive analysis of biological macromolecules. The student will be able to predict, on the basis of the structure of the active sites of the representative enzymes, their mechanism of action and acceleration of the reaction rate, using the main experimental kinetic investigation methods.
Specific skills.
a) knowledge and understanding:
through the lessons and exercises the student will have to know and understand the relationship between structure and function of the main classes of enzymes involved in the metabolic reactions of the cell; he/she will have to understand the structural basis of rate acceleration; he/she must be able to access and use the databases of the structures of biological macromolecules;
b) applying knowledge and understanding:
the student will be able to use the main theoretical paradigms to interpret the reaction mechanisms of enzymes, and to apply the acquired knowledge for the prediction of the main mechanistic characteristics of new enzymes;
c) making judgments:
the student will be able to describe in full autonomy the mechanism of a chemical reaction catalyzed by an enzyme, highlighting its distinctive characteristics and suggesting experiments to demonstrate the underlying mechanism;
d) communication skills:
the student must have the ability to present and explain the mechanisms of action of enzymes, based on the structure-function relationship determined experimentally, and using scientific and technical language correctly and with rigor;
e) learning skills:
the student will be able to critically examine the course topics, to propose new and independent experimental strategies where possible, to update himself through the consultation of bibliographic and structural databases (eg PubMed and RCSB Protein Data Bank).
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Bioorganic Reaction Mechanisms | 1st | 3 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the areas listed below. In general, the student will be able to describe the structure and reactivity of the main functional groups of organic compounds and in particular of those present in biological molecules. On the basis of the knowledge acquired, the student will be able to predict, based on the chemical structure of organic compounds, their reactivity and describe the reaction mechanisms in which the compounds are involved, both in application of the most common organic chemistry methodologies, as well as with a direct correlation to examples of biochemical mechanisms in which the same reactions are catalysed by enzymatic processes. In the future, the student will be able to rely on the knowledge and skills just described for the understanding and interpretation, on an organic chemistry point of view, of the main biochemical processes involved in all areas of biochemistry and other disciplines.
Specific skills.
a) knowledge and understanding:
Knowledge and understanding of the relationship between molecular structure and reactivity of the main functional groups involved in organic reactions and biochemical processes; understanding of reaction mechanisms’ chemical logic;
b) applying knowledge and understanding:
ability to interpret and explain the reaction mechanisms of the most important organic reactions; ability to apply knowledge to enzymatic processes involving these reaction mechanisms;
c) making judgments:
knowing how to interpret the mechanism of an organic reaction; being able to identify such mechanisms in biochemical processes; being able to evaluate the reactivity of organic molecules and of the main biological molecules based on the presence of functional groups;
d) communication skills:
knowing how to illustrate and explain the mechanisms of organic reactions with appropriate terms and with logical rigor; being able to draw the most important molecular structures of organic molecules as well as of biological molecules;
e) learning skills:
acquisition of the fundamentals and cognitive tools to continue independently in the study of bioorganic chemistry and biochemistry; acquisition of basic knowledge to progress independently in other biological chemistry disciplines.
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10598562 | Cellular Biochemistry | 1st | 12 | ENG |
Educational objectives General skills.
At the end of the course and passing the exam, the student will have acquired the knowledge and skills in the areas listed below. In general he will be able to: describe structure and function of the main classes of biological macromolecules; explain the main metabolic pathways in terms of regulation and interconnection; identify the mechanisms of adaptations of cellular functions in physiological and pathological conditions. On the basis of the acquired knowledge, the student will have the ability to interpret and explain biological phenomena from the biochemical point of view, describing their molecular basis in terms of structures and biochemical reactions. The students' communication skills will be developed thanks to the possibility of presenting and discussing a scientific paper related to the course program in the classroom. The use of concepts studied in class will be crucial for learning those critical and judgment skills necessary to evaluate the main experimental approaches used in biochemical research.
In the future, the student will be able to count on the knowledge and skills just described for the understanding of other disciplines and for working in clinical and research laboratories.
Specific skills
a) knowledge and understanding:
- Knowledge of cell structure and physiology. Membrane composition and intracellular trafficking. Mechanisms of signal transduction. Biochemical mechanisms of DNA replication and transcription. Ribosomal and non-ribosomal translation. Role of post-translational modifications. Protein sorting. Integrated cell metabolism and its regulation
-Knowledge and understanding of the relationship between structure and function of the macromolecules involved in the main cellular processes;
-understanding of the mechanisms that regulate the metabolism;
-knowledge of the main metabolic pathways in the physio-pathological processes;
b) ability to apply knowledge and understanding:
-ability to interpret and explain biological phenomena from a biochemical point of view;
-ability to gain insight into the interconnections of cellular functions in response to exogenous and endogenous stimuli;
c) autonomy of judgment:
-being able to identify biological and biomedical phenomena that can be explained through biochemical processes;
-being able to identify and evaluate cellular and metabolic adaptations in response to physiological and pathological signals;
d) communication skills:
-knowing how to illustrate and explain biochemical phenomena with appropriate terms and with logical reasoning;
-knowing how to describe and connect the main biosignaling mechanisms;
-being able to describe the biochemical mechanisms of the main cellular processes;
e) learning ability:
-acquisition of the fundamentals and cognitive skills to autonomously continue deepening cell biochemistry;
-acquisition of basic knowledge to progress independently in other biological disciplines;
-acquisition of the ability to quickly learn and apply biochemical and cellular knowledge in working contexts of planning research activities;
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Cell Molecular Biology | 1st | 3 | ENG |
Educational objectives General skills.
At the end of the course and passing the exam, the student will have acquired the knowledge and skills in the areas listed below. In general he will be able to: describe structure and function of the main classes of biological macromolecules; explain the main metabolic pathways in terms of regulation and interconnection; identify the mechanisms of adaptations of cellular functions in physiological and pathological conditions. On the basis of the acquired knowledge, the student will have the ability to interpret and explain biological phenomena from the biochemical point of view, describing their molecular basis in terms of structures and biochemical reactions. The students' communication skills will be developed thanks to the possibility of presenting and discussing a scientific paper related to the course program in the classroom. The use of concepts studied in class will be crucial for learning those critical and judgment skills necessary to evaluate the main experimental approaches used in biochemical research.
In the future, the student will be able to count on the knowledge and skills just described for the understanding of other disciplines and for working in clinical and research laboratories.
Specific skills.
a) knowledge and understanding:
-Knowledge and understanding of the relationship between structure and function of the informational macromolecules involved in the main cellular processes;
- knowledge of Biochemical mechanisms of cell homeostasis. DNA repair and recombination. Cell cycle. Cancer. Apoptosis.
-understanding of the mechanisms that regulate the biogenesis and homeostasis of macromolecules;
-knowledge of the main metabolic pathways controlling informational macromolecules in the physio-pathological processes;
b) ability to apply knowledge and understanding:
-ability to interpret and explain biological phenomena by macromolecules control in response to exogenous and endogenous stimuli;
c) autonomy of judgment:
-being able to identify the molecular mechanism controlling the main biological and biomedical phenomena;
-being able to identify and evaluate macromolecular adaptations in response to physiological and pathological signals;
d) communication skills:
-knowing how to illustrate and explain phenomena on involving informational macromolecules with appropriate terms and with logical reasoning;
-knowing how to describe and connect the main biosignaling mechanisms;
-being able to describe the molecular mechanisms of the main cellular processes at the molecular level;
e) learning ability:
-acquisition of the fundamentals and cognitive skills to autonomously continue deepening cellular processes;
-acquisition of basic knowledge to progress independently in other biological disciplines;
-acquisition of the ability to quickly learn and apply molecular and cellular knowledge in working contexts of planning research activities;
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Cell Structure and Metabolism | 1st | 9 | ENG |
Educational objectives General skills.
At the end of the course and passing the exam, the student will have acquired the knowledge and skills in the areas listed below. In general he will be able to: describe structure and function of the main classes of biological macromolecules; explain the main metabolic pathways in terms of regulation and interconnection; identify the mechanisms of adaptations of cellular functions in physiological and pathological conditions. On the basis of the acquired knowledge, the student will have the ability to interpret and explain biological phenomena from the biochemical point of view, describing their molecular basis in terms of structures and biochemical reactions. The students' communication skills will be developed thanks to the possibility of presenting and discussing a scientific paper related to the course program in the classroom. The use of concepts studied in class will be crucial for learning those critical and judgment skills necessary to evaluate the main experimental approaches used in biochemical research.
In the future, the student will be able to count on the knowledge and skills just described for the understanding of other disciplines and for working in clinical and research laboratories.
Specific skills
a) knowledge and understanding:
- Knowledge of cell structure and physiology. Membrane composition and intracellular trafficking. Mechanisms of signal transduction. Biochemical mechanisms of DNA replication and transcription. Ribosomal and non-ribosomal translation. Role of post-translational modifications. Protein sorting. Integrated cell metabolism and its regulation
-Knowledge and understanding of the relationship between structure and function of the macromolecules involved in the main cellular processes;
-understanding of the mechanisms that regulate the metabolism;
-knowledge of the main metabolic pathways in the physio-pathological processes;
b) ability to apply knowledge and understanding:
-ability to interpret and explain biological phenomena from a biochemical point of view;
-ability to gain insight into the interconnections of cellular functions in response to exogenous and endogenous stimuli;
c) autonomy of judgment:
-being able to identify biological and biomedical phenomena that can be explained through biochemical processes;
-being able to identify and evaluate cellular and metabolic adaptations in response to physiological and pathological signals;
d) communication skills:
-knowing how to illustrate and explain biochemical phenomena with appropriate terms and with logical reasoning;
-knowing how to describe and connect the main biosignaling mechanisms;
-being able to describe the biochemical mechanisms of the main cellular processes;
e) learning ability:
-acquisition of the fundamentals and cognitive skills to autonomously continue deepening cell biochemistry;
-acquisition of basic knowledge to progress independently in other biological disciplines;
-acquisition of the ability to quickly learn and apply biochemical and cellular knowledge in working contexts of planning research activities;
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10598564 | Structure and Function of Macromolecules | 1st | 9 | ENG |
Educational objectives General Skills
At the end of the course the students will know the main biochemical and biophysical principles applied to investigation techniques for the study of folding, structure/function and interactions of biological macromolecules. Given a specific biological problem, they will be able to identify which of the techniques covered during the course is more suitable to provide the expected information. Finally, students will be able to understand the meaning of the experimental data obtained with the different techniques within a scientific context.
The course is divided into three sections: Folding; Structure; Interactions.
The three sections aim at achieving the following common specific skills.
Specific Skills
a) knowledge and understanding:
Knowledge and understanding of the structure-function relationships in biological macromolecules;
Knowledge and understanding of the physical principle underlying the various techniques;
Knowledge of the main components of the instruments used to perform the different techniques;
Knowledge of the main fields of application of the techniques studied and their complementarity;
Understanding of the data analysis principles of the studied methodologies;
b) ability to apply knowledge and understanding:
Ability to perform, under the supervision of an expert, some of the techniques object of the laboratory classes;
Ability to interpret and understand the data obtained through the techniques covered by the course;
c) autonomy of judgment:
Being able to autonomously understand the results of a study (article, presentation) that is based on the techniques studied in the course. This skill will be reinforced by the analysis, through flipped classrooms, of recently published scientific works;
Ability to select, with respect to a specific biological problem, the most appropriate experimental techniques to tackle the problem;
Ability to solve autonomously the principal experimental problems that may arise using the methodologies described in the course;
Ability to design an experiment based on one of the techniques object of the laboratory classes;
d) communication skills:
Be able to describe the meaning and the working principles of the techniques analysed in the course;
Knowing how to illustrate the data and results obtained using the studied techniques. This skill will be achieved through flipped classroom and laboratory activities;
e) learning ability:
Acquisition of the fundamentals and cognitive tools to continue autonomously in the study of one or more of the techniques illustrated in the course;
Acquisition of the cognitive tools necessary to be trained in the autonomous use of one or more of the techniques studied in the course, in the field of public or private research;
Ability to quickly learn new experimental techniques;
Ability to dynamically adapt to the evolution of methodologies and scientific instruments characterising the biotechnology R&D laboratories.
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Macromolecules | 1st | 6 | ENG |
Educational objectives General Skills
At the end of the course the students will know the main biochemical and biophysical principles applied to investigation techniques for the study of folding, structure/function and interactions of biological macromolecules. Given a specific biological problem, they will be able to identify which of the techniques covered during the course is more suitable to provide the expected information. Finally, students will be able to understand the meaning of the experimental data obtained with the different techniques within a scientific context.
The course is divided into three sections: Folding; Structure; Interactions.
The three sections aim at achieving the following common specific skills.
Specific Skills
a) knowledge and understanding:
Knowledge and understanding of the structure-function relationships in biological macromolecules;
Knowledge and understanding of the physical principle underlying the various techniques;
Knowledge of the main components of the instruments used to perform the different techniques;
Knowledge of the main fields of application of the techniques studied and their complementarity;
Understanding of the data analysis principles of the studied methodologies;
b) ability to apply knowledge and understanding:
Ability to perform, under the supervision of an expert, some of the techniques object of the laboratory classes;
Ability to interpret and understand the data obtained through the techniques covered by the course;
c) autonomy of judgment:
Being able to autonomously understand the results of a study (article, presentation) that is based on the techniques studied in the course. This skill will be reinforced by the analysis, through flipped classrooms, of recently published scientific works;
Ability to select, with respect to a specific biological problem, the most appropriate experimental techniques to tackle the problem;
Ability to solve autonomously the principal experimental problems that may arise using the methodologies described in the course;
Ability to design an experiment based on one of the techniques object of the laboratory classes;
d) communication skills:
Be able to describe the meaning and the working principles of the techniques analysed in the course;
Knowing how to illustrate the data and results obtained using the studied techniques. This skill will be achieved through flipped classroom and laboratory activities;
e) learning ability:
Acquisition of the fundamentals and cognitive tools to continue autonomously in the study of one or more of the techniques illustrated in the course;
Acquisition of the cognitive tools necessary to be trained in the autonomous use of one or more of the techniques studied in the course, in the field of public or private research;
Ability to quickly learn new experimental techniques;
Ability to dynamically adapt to the evolution of methodologies and scientific instruments characterising the biotechnology R&D laboratories.
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Biophysical Methods | 1st | 3 | ENG |
Educational objectives General Skills
At the end of the course the students will know the main biochemical and biophysical principles applied to investigation techniques for the study of folding, structure/function and interactions of biological macromolecules. Given a specific biological problem, they will be able to identify which of the techniques covered during the course is more suitable to provide the expected information. Finally, students will be able to understand the meaning of the experimental data obtained with the different techniques within a scientific context.
The course is divided into three sections: Folding; Structure; Interactions.
The three sections aim at achieving the following common specific skills.
Specific Skills
a) knowledge and understanding:
Knowledge and understanding of the structure-function relationships in biological macromolecules;
Knowledge and understanding of the physical principle underlying the various techniques;
Knowledge of the main components of the instruments used to perform the different techniques;
Knowledge of the main fields of application of the techniques studied and their complementarity;
Understanding of the data analysis principles of the studied methodologies;
b) ability to apply knowledge and understanding:
Ability to perform, under the supervision of an expert, some of the techniques object of the laboratory classes;
Ability to interpret and understand the data obtained through the techniques covered by the course;
c) autonomy of judgment:
Being able to autonomously understand the results of a study (article, presentation) that is based on the techniques studied in the course. This skill will be reinforced by the analysis, through flipped classrooms, of recently published scientific works;
Ability to select, with respect to a specific biological problem, the most appropriate experimental techniques to tackle the problem;
Ability to solve autonomously the principal experimental problems that may arise using the methodologies described in the course;
Ability to design an experiment based on one of the techniques object of the laboratory classes;
d) communication skills:
Be able to describe the meaning and the working principles of the techniques analysed in the course;
Knowing how to illustrate the data and results obtained using the studied techniques. This skill will be achieved through flipped classroom and laboratory activities;
e) learning ability:
Acquisition of the fundamentals and cognitive tools to continue autonomously in the study of one or more of the techniques illustrated in the course;
Acquisition of the cognitive tools necessary to be trained in the autonomous use of one or more of the techniques studied in the course, in the field of public or private research;
Ability to quickly learn new experimental techniques;
Ability to dynamically adapt to the evolution of methodologies and scientific instruments characterising the biotechnology R&D laboratories.
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10598565 | Microorganism and Plant Biochemistry | 1st | 6 | ENG |
Educational objectives The course of "Microorganism and Plant Biochemistry" is divided into two integrated modules: "Microorganism Biochemistry and Physiology" and "Plant Biochemistry and Physiology". The aim of the course is to integrate and deepen the general knowledge and skills of biochemistry and metabolism, previously acquired by the students, with specific skills in the field of biochemistry and physiology of plants and microorganisms, which are at the base of modern biotechnologies used in industrial, environmental, medical, and pharmaceutical fields.
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Plant Biochemistry and Physiology | 1st | 3 | ENG |
Educational objectives General skills
The module aims at providing the basis for understanding the biochemical mechanisms and mechanistic “logic” of some important specific plant processes. It introduces the students to the complexity and potentiality of the plant metabolism and the role of plant specialized metabolites in the interaction with the environment. Some of these metabolites become molecules used as drugs for pharmaceutical employment. The module also aims at providing a view on how recent methodological advances in biochemistry and structural biology are boosting the knowledge of the mechanisms underlying the perception and response to biotic stress and the function of the plant immune system, as compared to the immune system of animals.
In addition to the lectures, training activities include thematic seminars organized for in-depth analysis and discussions by the students in the classroom focusing on both reviews and recent high-quality experimental publications. This will expose students, on the one hand, to a broad vision of relevant issues and topics covered by the module and, on the other hand, to exemplary experimental paths that provide the knowledge of methods and tools suitable for modern investigations.
Specific skills
a) knowledge and understanding
Upon successful completion, students will:
1. Understand the function of the main biochemical processes and metabolism of plants, the plant immunity and the biochemical relationships between the different types of plant cells and tissues;
2. Have the ability to compare and critically evaluate recent advances in plant biochemistry;
3. Understand the biochemical evolution and the adaptive strategies of plant metabolism;
4. Understand the biochemical logic of the specific perception and transduction events occurring during plant-pathogen interactions;
5. Understand the role of molecules and proteins contrasting plant diseases and their possible exploitation for crop improvement;
6. Understand how the biochemical processes can be manipulated;
7. Start a research by critically reading the literature and learnig how new findings influence progress in the knowledge of plant biology.
b) applying knowledge and understanding
- ability to recognize the nature of the most important metabolites of plant origin;
- ability to illustrate the metabolic pathways of plants;
- ability to illustrate the basic mechanisms of plant immunity;
- ability of a correct interpretation of a scientific work.
c) making judgments
- acquire skills for autonomous and critical evaluation of the issues related to biochemistry and plant immunity and, more in general, related to biochemical research;
- ability to identify the most suitable methodological approaches for basic and/or applied research in the field of biochemistry and plant immunity;
- be able to self-assess skills.
d) communication skills
The student must be able to:
- illustrate, with appropriate terms, adequate rigor and scientific language, its general knowledge and recent results on the biochemical and structural aspects of plant metabolism and immunity;
- process in the best way the information to be disseminated;
- efficiently communicate in oral form, also through the use of information technology and multimedia communication tools.
e) learning skills
- deepen the critical knowledge in the specific and general field of plant biochemistry
- be able to lead and sustain a critical discussion presenting complex ideas in a concise and clear way.
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Microorganism Biochemistry and Physiology | 1st | 3 | ENG |
Educational objectives General skills
At the end of the course and upon passing the exam, the student will have acquired the knowledge and skills on the biochemical and physiological processes specific to prokaryotic cells and will be able to explain in biochemical terms the diversity and lifestyle of the different Bacteria based on structural and nutritional properties and respiratory and fermentative metabolic abilities. The student will acquire specific knowledge related to the biochemical characteristics of microorganisms in the physiological response to stress, in the ability to adapt and communicate between cells. The analytical and learning skills of the students will be exercised through the assignment of original scientific works to be elaborated as oral presentations, useful for the deepening of the experimental methods of genetics and biochemistry used for the study of microbial physiology. The discussion of the presentations of the students in the classroom will allow to deepen the concepts studied in class, improving the communication skills of the students through discussion and interpretation of original experimental data.
Specific skills
a) knowledge and understanding:
knowledge of the biosynthetic pathways that lead to the biogenesis of the peculiar components of the prokaryotic cell and the transport and secretion systems; knowledge of the factors of diversity and metabolic versatility that characterize prokaryotes and that affect respiratory and fermentative microbial growth and metabolism;
b) applying knowledge and understanding:
ability to recognize and classify microorganisms based on knowledge of their metabolic and respiratory abilities and adaptive strategies;
know how to describe the main metabolic pathways proper to prokaryotic cells;
c) making judgments:
know how to analyze recent literature related to the aspects of biochemistry and microbial physiology and critically reading of the results;
know how to apply the knowledge of physiology and biochemistry of bacteria to industrial and biotechnological research projects;
d) communication skills:
know how to illustrate and explain with appropriate terms and with scientific rigor research reports and scientific publications including aspects of biochemistry and microbial physiology;
e) learning skills:
acquisition of the fundamentals and cognitive tools to continue independently in the deepening of Microbiology;
acquisition of basic knowledge to progress independently in other biological disciplines
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10598566 | Physiopathology and Pharmacology | 2nd | 9 | ENG |
Educational objectives This course provides an introduction to the pathologic basis of disease and drug treatment, and draws together knowledge gained from prerequisite subjects into the study of the aetiology and pathogenesis of disease. It focuses on the interaction between the immune and the nervous systems at molecular, cellular and systems levels, and provides an overview of current and developing concepts in Neuroimmunology from both Neuroscience and Immunology perspectives. It aims to familiarize students with the molecular and cellular elements of interconnectivity between the immune and nervous systems and the effect of neuro-immune interaction on physiological responses and disease processes. Moreover, it provides the basis of crosstalk between cells of immune and nervous systems in the stress response and in the onset and development of neurological disorders. Students will be introduced to concepts of cellular injury, inflammation and necrosis. The fundamentals of pharmacology including targets of drug action, absorption and metabolism of drugs and drug development will also be detailed. This provides a platform for commencing the integrated study of pathophysiology, pathology and drug treatment of various disorders, beginning with pain, inflammation and neoplasia.
Specific skills.
a) knowledge and understanding
- Knowledge and understanding of the relationship between structure and function of the main cell types of the nervous system;
- understanding of neuronal and glial development;
- knowledge of the main signaling pathways of neurotransmission and drug targets;
- understanding of the principles and phenomena underlying the main neuropharmacological tools;
b) applying knowledge and understanding
- ability to interpret and explain the neuronal functions from a physiological and pharmacological point of view;
- ability to apply appropriate techniques to specific experimental problems;
c) making judgments
- be able to understand physiological relationships between cells;
- be able to identify physiological phenomena that can be explained using a pharmacological approach;
- be able to select and evaluate the most appropriate techniques to solve a specific experimental problem;
d) communication skills
- be able to illustrate and explain physiological phenomena with appropriate terms and with logical rigor;
- be able to explain pharmacological drug action in general;
- be able to describe how the main physiological and pharmacological techniques work;
e) learning skills
- acquisition of the fundamentals and cognitive tools to continue independently in the study of physiology and pharmacology;
- acquisition of the basic knowledge necessary to progress autonomously in other biological disciplines;
- ability to learn quickly and apply physiological and pharmacological techniques in laboratory working environments;
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Pharmacology | 2nd | 3 | ENG |
Educational objectives This course provides an introduction to the pathologic basis of disease and drug treatment, and draws together knowledge gained from prerequisite subjects into the study of the aetiology and pathogenesis of disease. It focuses on the interaction between the immune and the nervous systems at molecular, cellular and systems levels, and provides an overview of current and developing concepts in Neuroimmunology from both Neuroscience and Immunology perspectives. It aims to familiarize students with the molecular and cellular elements of interconnectivity between the immune and nervous systems and the effect of neuro-immune interaction on physiological responses and disease processes. Moreover, it provides the basis of crosstalk between cells of immune and nervous systems in the stress response and in the onset and development of neurological disorders. Students will be introduced to concepts of cellular injury, inflammation and necrosis. The fundamentals of pharmacology including targets of drug action, absorption and metabolism of drugs and drug development will also be detailed. This provides a platform for commencing the integrated study of pathophysiology, pathology and drug treatment of various disorders, beginning with pain, inflammation and neoplasia.
Specific skills.
a) knowledge and understanding
- Knowledge and understanding of the relationship between structure and function of the main cell types of the nervous system;
- understanding of neuronal and glial development;
- knowledge of the main signaling pathways of neurotransmission and drug targets;
- understanding of the principles and phenomena underlying the main neuropharmacological tools;
b) applying knowledge and understanding
- ability to interpret and explain the neuronal functions from a physiological and pharmacological point of view;
- ability to apply appropriate techniques to specific experimental problems;
c) making judgments
- be able to understand physiological relationships between cells;
- be able to identify physiological phenomena that can be explained using a pharmacological approach;
- be able to select and evaluate the most appropriate techniques to solve a specific experimental problem;
d) communication skills
- be able to illustrate and explain physiological phenomena with appropriate terms and with logical rigor;
- be able to explain pharmacological drug action in general;
- be able to describe how the main physiological and pharmacological techniques work;
e) learning skills
- acquisition of the fundamentals and cognitive tools to continue independently in the study of physiology and pharmacology;
- acquisition of the basic knowledge necessary to progress autonomously in other biological disciplines;
- ability to learn quickly and apply physiological and pharmacological techniques in laboratory working environments;
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Physiology and Pathology | 2nd | 6 | ENG |
Educational objectives This course provides an introduction to the pathologic basis of disease and drug treatment, and draws together knowledge gained from prerequisite subjects into the study of the aetiology and pathogenesis of disease. It focuses on the interaction between the immune and the nervous systems at molecular, cellular and systems levels, and provides an overview of current and developing concepts in Neuroimmunology from both Neuroscience and Immunology perspectives. It aims to familiarize students with the molecular and cellular elements of interconnectivity between the immune and nervous systems and the effect of neuro-immune interaction on physiological responses and disease processes. Moreover, it provides the basis of crosstalk between cells of immune and nervous systems in the stress response and in the onset and development of neurological disorders. Students will be introduced to concepts of cellular injury, inflammation and necrosis. The fundamentals of pharmacology including targets of drug action, absorption and metabolism of drugs and drug development will also be detailed. This provides a platform for commencing the integrated study of pathophysiology, pathology and drug treatment of various disorders, beginning with pain, inflammation and neoplasia.
Specific skills.
a) knowledge and understanding
- Knowledge and understanding of the relationship between structure and function of the main cell types of the nervous system;
- understanding of neuronal and glial development;
- knowledge of the main signaling pathways of neurotransmission and drug targets;
- understanding of the principles and phenomena underlying the main neuropharmacological tools;
b) applying knowledge and understanding
- ability to interpret and explain the neuronal functions from a physiological and pharmacological point of view;
- ability to apply appropriate techniques to specific experimental problems;
c) making judgments
- be able to understand physiological relationships between cells;
- be able to identify physiological phenomena that can be explained using a pharmacological approach;
- be able to select and evaluate the most appropriate techniques to solve a specific experimental problem;
d) communication skills
- be able to illustrate and explain physiological phenomena with appropriate terms and with logical rigor;
- be able to explain pharmacological drug action in general;
- be able to describe how the main physiological and pharmacological techniques work;
e) learning skills
- acquisition of the fundamentals and cognitive tools to continue independently in the study of physiology and pharmacology;
- acquisition of the basic knowledge necessary to progress autonomously in other biological disciplines;
- ability to learn quickly and apply physiological and pharmacological techniques in laboratory working environments;
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10598567 | Bioinformatics and Data Handling | 2nd | 9 | ENG |
Educational objectives General Skills
The aim of the course is to teach students the basic knowledge of data handling and statistical data analysis. The first step of the course will be to know the procedure for collecting and organizing data, using data analysis software. In addition, basic statistical tests and some of the best known techniques of analysis, visualization and classification of data will be taught. Students will be able to design analyses, organize data appropriately and interpret results. The course also aims to provide basic programming knowledge for statistical data analysis and to learn how to efficiently present the final results. Course materials and scientific articles will be made available for further information.
Specific skills
a) knowledge and understanding:
• Understanding both the basic statistics and the management of biological data;
• Basic knowledge of programming languages and software used for data analysis;
b) ability to apply knowledge and understanding:
• Ability to use software and programming languages in order to analyze biological data, perform statistical tests, organize and query several different types of data;
• Ability to apply learned techniques to specific biological problems;
• Ability to investigate the properties of biological data as response to a scientific question;
c) autonomy of judgment:
• Knowing how to organize different types of biological data;
• Knowing how to perform statistical analysis on biological data;
• Knowing how to independently design and write scripts for data analysis;
• Knowing how to select and interpret the main statistical tests and the main data analysis techniques;
d) communication skills:
• Ability to discuss which techniques are required for a specific data analysis;
• Knowing how to properly present the results obtained with the right choice of the type of graphic representation;
• Knowing how to describe the logic of programming design;
e) learning ability:
• Knowing how to formulate the question of interest and design the corresponding analysis;
• Acquire the key concepts and principal tools to be independently adopted also to new problems, which are not directly connected with the cases discussed during the lessons;
• Ability to learn new concepts of data analysis and statistics, starting from the basic knowledge acquired during the course.
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Bioinformatics | 2nd | 6 | ENG |
Educational objectives General skills
This course is aimed at providing the students with an overview of the most common Bioinformatics techniques and to describe their theoretical basis. About half of the course will be spent learning the practical use of programs implementing these techniques. At the end, students will be able to rationally and effectively use the most widespread programs for sequence and structure analysis and to understand correctly their results. The course consists of lectures that cover the main topics of the program and practical exercises. Exercises are carried out in a computer room with the use of open-source software for the visualization of the tridimensional structure of macromolecules. Beside textbooks, students have access to lectures' slides, scientific articles, and other teaching resources made available throughout web sites.
Specific skills
a) knowledge and understanding:
• Understanding the theory of Bioinformatics algorithms;
• Knowledge of the tools necessary for a detailed and critical analysis of the sequences and structures of proteins and their macromolecular complexes using Bioinformatics;
b) ability to apply knowledge and understanding:
• Ability to use open-source software for the analysis of sequences and structures of biological macromolecules;
• Ability to apply the techniques learned to specific problems;
c) autonomy of judgment:
• Knowing how to independently solve Bioinformatics problems;
• Knowing how to independently conduct analyses on biological data;
• Knowing how to consult the main biological databases;
• Knowing how to select and evaluate the most appropriate Bioinformatics techniques to solve a given problem;
d) communication skills:
• Acquire the ability to discuss and transfer the gained skills to support their arguments;
• Knowing how to present the data obtained from the analyses with appropriate terms and with logical rigor;
• Knowing how to describe the functioning of the main Bioinformatics software;
e) learning ability:
• Be able to align the skills learned with the progress of research in Biology and Bioinformatics;
• Acquire the fundamentals and cognitive tools to autonomously continue in the deepening of Bioinformatics;
• Ability to quickly learn and apply Bioinformatics techniques in laboratory work contexts;
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Data Handling | 2nd | 3 | ENG |
Educational objectives General Skills
The aim of the course is to teach students the basic knowledge of data handling and statistical data analysis. The first step of the course will be to know the procedure for collecting and organizing data, using data analysis software. In addition, basic statistical tests and some of the best known techniques of analysis, visualization and classification of data will be taught. Students will be able to design analyses, organize data appropriately and interpret results. The course also aims to provide basic programming knowledge for statistical data analysis and to learn how to efficiently present the final results. Course materials and scientific articles will be made available for further information.
Specific skills
a) knowledge and understanding:
• Understanding both the basic statistics and the management of biological data;
• Basic knowledge of programming languages and software used for data analysis;
b) ability to apply knowledge and understanding:
• Ability to use software and programming languages in order to analyze biological data, perform statistical tests, organize and query several different types of data;
• Ability to apply learned techniques to specific biological problems;
• Ability to investigate the properties of biological data as response to a scientific question;
c) autonomy of judgment:
• Knowing how to organize different types of biological data;
• Knowing how to perform statistical analysis on biological data;
• Knowing how to independently design and write scripts for data analysis;
• Knowing how to select and interpret the main statistical tests and the main data analysis techniques;
d) communication skills:
• Ability to discuss which techniques are required for a specific data analysis;
• Knowing how to properly present the results obtained with the right choice of the type of graphic representation;
• Knowing how to describe the logic of programming design;
e) learning ability:
• Knowing how to formulate the question of interest and design the corresponding analysis;
• Acquire the key concepts and principal tools to be independently adopted also to new problems, which are not directly connected with the cases discussed during the lessons;
• Ability to learn new concepts of data analysis and statistics, starting from the basic knowledge acquired during the course.
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10598568 | Biochemical Methodologies | 2nd | 9 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the areas below. In general, it will be able to: explain the principles and the applications of the most common biochemical methodologies and set up an experiment starting from the consultation of the literature up to its execution on the laboratory counter. On the basis of the acquired knowledge, the student will have the ability to interpret and explain the results of the biochemical experiments through the interpretation and discussion of the experimental results. Students' critical and judgmental skills will be developed through numerous classroom exercises in which numerical exercises and database research will be carried out, and several practical laboratory experiences (starting from cloning of PCR-produced DNA fragments to purification and characterization of proteins with enzymatic activity). Communication skills will be exercised during the theoretical and practical lessons, which will include moments of open discussion. In the future, the student will be able to count on the knowledge and skills herein acquired for work in analysis and research laboratories.
Specific skills.
a) Knowledge and understanding of the following:
- methodologies concerning recombinant DNA (PCR, restriction, ligation);
- methodologies for the purification of DNA and RNA from cell cultures and tissues;
- methodologies for the analysis of nucleic acids: mRNA reverse transcriptase PCR (RT-PCR), quantitative PCR (Real-time qPCR);
- basic techniques of cell culture;
- preparative methods for the purification of proteins (centrifugation, chromatography);
- analytical methodologies for the study of DNA and proteins (electrophoresis);
- spectrophotometric techniques applied to the study of proteins and to enzyme kinetics;
b) Ability to apply knowledge and understanding:
- ability to apply the appropriate techniques to specific experimental problems, starting from scientific literature and database research;
- ability to design and carry out biochemical experiments concerning structure and function of DNA, proteins and enzymes;
- ability to interpret and discuss experimental results and to explain biological phenomena with biochemical argumentations;
c) Autonomy of judgment:
- to be able to solve autonomously both experimental and numerical problems;
- to know how to select and evaluate the most appropriate techniques to solve a specific experimental problem;
d) Communication skills:
- to be able to illustrate and explain biochemical phenomena with appropriate terms and logical rigor;
- to be able to describe the principles behind the main biochemical techniques;
- to know how to discuss and describe the experimental results in a critical key;
e) Learning ability:
- acquisition of the fundamentals cognitive tools to be able to independently continue the study of biochemistry, both from a theoretical and a practical point of view;
- acquisition of basic knowledge to progress autonomously in other related biological disciplines.
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Protein Purification and Characterization | 2nd | 6 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the areas below. In general, it will be able to: explain the principles and the applications of the most common biochemical methodologies and set up an experiment starting from the consultation of the literature up to its execution on the laboratory counter. On the basis of the acquired knowledge, the student will have the ability to interpret and explain the results of the biochemical experiments through the interpretation and discussion of the experimental results. Students' critical and judgmental skills will be developed through numerous classroom exercises in which numerical exercises and database research will be carried out, and several practical laboratory experiences (starting from cloning of PCR-produced DNA fragments to purification and characterization of proteins with enzymatic activity). Communication skills will be exercised during the theoretical and practical lessons, which will include moments of open discussion. In the future, the student will be able to count on the knowledge and skills herein acquired for work in analysis and research laboratories.
Specific skills.
a) Knowledge and understanding of the following:
- methodologies concerning recombinant DNA (PCR, restriction, ligation);
- methodologies for the purification of DNA and RNA from cell cultures and tissues;
- methodologies for the analysis of nucleic acids: mRNA reverse transcriptase PCR (RT-PCR), quantitative PCR (Real-time qPCR);
- basic techniques of cell culture;
- preparative methods for the purification of proteins (centrifugation, chromatography);
- analytical methodologies for the study of DNA and proteins (electrophoresis);
- spectrophotometric techniques applied to the study of proteins and to enzyme kinetics;
b) Ability to apply knowledge and understanding:
- ability to apply the appropriate techniques to specific experimental problems, starting from scientific literature and database research;
- ability to design and carry out biochemical experiments concerning structure and function of DNA, proteins and enzymes;
- ability to interpret and discuss experimental results and to explain biological phenomena with biochemical argumentations;
c) Autonomy of judgment:
- to be able to solve autonomously both experimental and numerical problems;
- to know how to select and evaluate the most appropriate techniques to solve a specific experimental problem;
d) Communication skills:
- to be able to illustrate and explain biochemical phenomena with appropriate terms and logical rigor;
- to be able to describe the principles behind the main biochemical techniques;
- to know how to discuss and describe the experimental results in a critical key;
e) Learning ability:
- acquisition of the fundamentals cognitive tools to be able to independently continue the study of biochemistry, both from a theoretical and a practical point of view;
- acquisition of basic knowledge to progress autonomously in other related biological disciplines.
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Molecular Biology Techniques | 2nd | 3 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the areas below. In general, it will be able to: explain the principles and the applications of the most common biochemical methodologies and set up an experiment starting from the consultation of the literature up to its execution on the laboratory counter. On the basis of the acquired knowledge, the student will have the ability to interpret and explain the results of the biochemical experiments through the interpretation and discussion of the experimental results. Students' critical and judgmental skills will be developed through numerous classroom exercises in which numerical exercises and database research will be carried out, and several practical laboratory experiences (starting from cloning of PCR-produced DNA fragments to purification and characterization of proteins with enzymatic activity). Communication skills will be exercised during the theoretical and practical lessons, which will include moments of open discussion. In the future, the student will be able to count on the knowledge and skills herein acquired for work in analysis and research laboratories.
Specific skills.
a) Knowledge and understanding of the following:
- methodologies concerning recombinant DNA (PCR, restriction, ligation);
- methodologies for the purification of DNA and RNA from cell cultures and tissues;
- methodologies for the analysis of nucleic acids: mRNA reverse transcriptase PCR (RT-PCR), quantitative PCR (Real-time qPCR);
- basic techniques of cell culture;
- preparative methods for the purification of proteins (centrifugation, chromatography);
- analytical methodologies for the study of DNA and proteins (electrophoresis);
- spectrophotometric techniques applied to the study of proteins and to enzyme kinetics;
b) Ability to apply knowledge and understanding:
- ability to apply the appropriate techniques to specific experimental problems, starting from scientific literature and database research;
- ability to design and carry out biochemical experiments concerning structure and function of DNA, proteins and enzymes;
- ability to interpret and discuss experimental results and to explain biological phenomena with biochemical argumentations;
c) Autonomy of judgment:
- to be able to solve autonomously both experimental and numerical problems;
- to know how to select and evaluate the most appropriate techniques to solve a specific experimental problem;
d) Communication skills:
- to be able to illustrate and explain biochemical phenomena with appropriate terms and logical rigor;
- to be able to describe the principles behind the main biochemical techniques;
- to know how to discuss and describe the experimental results in a critical key;
e) Learning ability:
- acquisition of the fundamentals cognitive tools to be able to independently continue the study of biochemistry, both from a theoretical and a practical point of view;
- acquisition of basic knowledge to progress autonomously in other related biological disciplines.
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10598569 | Biochemical Biotechnologies I | 2nd | 6 | ENG |
Educational objectives General skills
The course aims to provide students with the biochemical bases to: understand the most advanced biotechnological applications of enzymes, proteins and complex multienzymatic systems; understand the methods and strategies required for protein engineering. Students' critical and judgment skills will be developed thanks to class exercises, in which videos will be projected and numerical exercises carried out, and practical laboratory experiences, in which they will apply the concepts studied in class, performing and interpreting experiments that they will be in the future able to reproduce autonomously. Communication skills will be implemented during the theoretical lessons, which include moments of open discussion.
Specific skills
A) knowledge and understanding
- knowledge of the main biotechnological applications of enzymes;
- knowledge of the main features of complex multienzymatic systems of biotechnological interest;
- knowledge of the strategies required for protein and enzyme production and engineering;
B) ability to apply knowledge and understanding
- exploiting the knowledge of biochemical techniques to investigate the applications of enzymes and proteins in the field of biotechnology
- understanding and evaluating the impact of structural modifications of biological macromolecules on their biological function;
C) Making judgements
- critical thinking through the study of examples of biotechnological applications of proteins and enzymes taken from the scientific literature
- learning by questioning;
D) Communication skills
- ability to communicate what has been learned during the oral exam;
E) Learning skills
- learning the specific terminology;
- ability to make the logical connections between the topics covered;
- ability to identify the most relevant topics.
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Applied Biochemistry | 2nd | 3 | ENG |
Educational objectives General skills
The course aims to provide students with the biochemical bases to: understand the most advanced biotechnological applications of enzymes, proteins and complex multienzymatic systems; understand the methods and strategies required for protein engineering. Students' critical and judgment skills will be developed thanks to class exercises, in which videos will be projected and numerical exercises carried out, and practical laboratory experiences, in which they will apply the concepts studied in class, performing and interpreting experiments that they will be in the future able to reproduce autonomously. Communication skills will be implemented during the theoretical lessons, which include moments of open discussion.
Specific skills
A) knowledge and understanding
- knowledge of the main biotechnological applications of enzymes;
- knowledge of the main features of complex multienzymatic systems of biotechnological interest;
- knowledge of the strategies required for protein and enzyme production and engineering;
B) ability to apply knowledge and understanding
- exploiting the knowledge of biochemical techniques to investigate the applications of enzymes and proteins in the field of biotechnology
- understanding and evaluating the impact of structural modifications of biological macromolecules on their biological function;
C) Making judgements
- critical thinking through the study of examples of biotechnological applications of proteins and enzymes taken from the scientific literature
- learning by questioning;
D) Communication skills
- ability to communicate what has been learned during the oral exam;
E) Learning skills
- learning the specific terminology;
- ability to make the logical connections between the topics covered;
- ability to identify the most relevant topics.
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Microbial Biotechnologies: Industrial Applications | 2nd | 3 | ENG |
Educational objectives General skills.
At the end of the course and after passing the exam, the student will have acquired the knowledge and skills in the areas listed below. In general, he/she will be able to: know the biochemistry and the main genome editing methods for microorganisms for industrial use, design the genetic improvement of industrial strains and critically read articles in international scientific journals concerning the topics of the course. On the basis of the acquired knowledge, the student will have the ability to interpret and explain the applications of synthetic biology and the rewiring of metabolic biochemical circuits. Students' critical and judgment skills will be developed thanks to class exercises, in which videos will be projected and numerical exercises carried out, and practical laboratory experiences, in which they will apply the concepts studied in class, performing and interpreting experiments that will be in the future able to reproduce autonomously. Communication skills will be exercised during the theoretical lessons, which include moments of open discussion. In the future, the student will be able to integrate the knowledge and skills just described for the applications of microbial biotechnologies also in other fields, such as the medical one, and in basic research.
Specific skills.
a) knowledge and understanding:
- Knowledge and understanding of the physiology, biochemistry and genetics of microorganisms used in industrial microbial biotechnologies;
- Knowledge of the different microbial metabolisms;
- Knowledge and understanding of the main genome editing techniques on microorganisms of industrial interest;
- Knowledge and understanding of the principles of synthetic biology and metabolic engineering;
b) ability to apply knowledge and understanding:
- ability to describe and explain the physiology and biochemistry of industrial microorganisms;
- ability to apply appropriate techniques to problems of industrial production;
c) autonomy of judgment:
- knowing how to independently solve microbial growth problems;
- being able to identify the best microorganisms for the production of a metabolite of interest;
- knowing how to select and evaluate the most appropriate techniques to solve a bottleneck in the production of a metabolite;
d) communication skills:
- be able to illustrate and explain the physiology and biochemistry of the microorganisms of interest with appropriate terms and with logical rigor;
- being able to describe the main molecular techniques for the modification of microorganisms;
- being able to describe the industrial productions described in class;
e) learning skills:
- acquisition of the fundamentals and cognitive tools to autonomously pursue the study of microbial biotechnologies;
- acquisition of basic knowledge for the applications of synthetic biology and metabolic engineering;
- ability to apply biochemical and molecular techniques in laboratory working environments.
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THREE-DIMENSIONAL MODELING | | | |